ensembl-mcp-server

Name: ensembl-mcp-server
Author: cyanheads

cyanheads

Look up genes, fetch sequences, predict variant consequences, find orthologs, and retrieve cross-database xrefs from Ensembl REST via MCP. STDIO or Streamable HTTP.

接入配置

选择客户端，复制配置，再按项目文档补齐环境变量。

一键添加到 Cursor 一键添加到 VS Code

本地运行

claude mcp add ensembl -- npx -y @cyanheads/ensembl-mcp-server

~/.codex/config.toml

[mcp_servers.ensembl]
command = "npx"
args = ["-y", "@cyanheads/ensembl-mcp-server"]

# codex mcp add ensembl -- npx -y @cyanheads/ensembl-mcp-server

~/.cursor/mcp.json

{
  "mcpServers": {
    "ensembl": {
      "command": "npx",
      "args": [
        "-y",
        "@cyanheads/ensembl-mcp-server"
      ]
    }
  }
}

.vscode/mcp.json

{
  "servers": {
    "ensembl": {
      "type": "stdio",
      "command": "npx",
      "args": [
        "-y",
        "@cyanheads/ensembl-mcp-server"
      ]
    }
  }
}

~/.gemini/settings.json

{
  "mcpServers": {
    "ensembl": {
      "command": "npx",
      "args": [
        "-y",
        "@cyanheads/ensembl-mcp-server"
      ]
    }
  }
}

claude_desktop_config.json

{
  "mcpServers": {
    "ensembl": {
      "command": "npx",
      "args": [
        "-y",
        "@cyanheads/ensembl-mcp-server"
      ]
    }
  }
}

.trae/mcp.json

{
  "mcpServers": {
    "ensembl": {
      "command": "npx",
      "args": [
        "-y",
        "@cyanheads/ensembl-mcp-server"
      ]
    }
  }
}

远程托管

claude mcp add --transport http ensembl https://ensembl.caseyjhand.com/mcp