BioModels — the public repository of curated, executable mathematical models of biological systems (SBML, CellML, BioPAX and more), searchable by pathway, disease, organism, gene or author, with the model files themselves and the paper each model came from.
接入配置
选择客户端，复制配置，再按项目文档补齐环境变量。
claude mcp add --transport http biomodels https://gateway.pipeworx.io/biomodels/mcp~/.codex/config.toml
[mcp_servers.biomodels]
url = "https://gateway.pipeworx.io/biomodels/mcp"
# codex mcp add biomodels --url https://gateway.pipeworx.io/biomodels/mcp~/.cursor/mcp.json
{
"mcpServers": {
"biomodels": {
"url": "https://gateway.pipeworx.io/biomodels/mcp"
}
}
}.vscode/mcp.json
{
"servers": {
"biomodels": {
"type": "http",
"url": "https://gateway.pipeworx.io/biomodels/mcp"
}
}
}~/.gemini/settings.json
{
"mcpServers": {
"biomodels": {
"httpUrl": "https://gateway.pipeworx.io/biomodels/mcp"
}
}
}claude_desktop_config.json · Customize › Connectors › Add custom connector
{
"mcpServers": {
"biomodels": {
"command": "npx",
"args": [
"-y",
"mcp-remote",
"https://gateway.pipeworx.io/biomodels/mcp"
]
}
}
}.trae/mcp.json
{
"mcpServers": {
"biomodels": {
"url": "https://gateway.pipeworx.io/biomodels/mcp"
}
}
}