FHIR MCP Server

Name: FHIR MCP Server
Author: Momentum

Momentum

Get started Repository

Connect to FHIR servers and query medical data such as patient history in natural language.

Setup

Choose your client, copy the config, then fill in any required environment variables.

Add to Cursor Add to VS Code

claude mcp add fhir-server-momentum --env BRAVE_API_KEY='<BRAVE_API_KEY>' --env GITHUB_TOKEN='<GITHUB_TOKEN>' -- docker run -i --rm --init --mount 'type=bind,source=<your-project-path>/app,target=/root_project/app' --mount 'type=bind,source=<your-project-path>/config/.env,target=/root_project/config/.env' mcp-server:latest

~/.codex/config.toml

[mcp_servers.fhir-server-momentum]
command = "docker"
args = ["run", "-i", "--rm", "--init", "--mount", "type=bind,source=<your-project-path>/app,target=/root_project/app", "--mount", "type=bind,source=<your-project-path>/config/.env,target=/root_project/config/.env", "mcp-server:latest"]
env = { BRAVE_API_KEY = "<BRAVE_API_KEY>", GITHUB_TOKEN = "<GITHUB_TOKEN>" }

# codex mcp add fhir-server-momentum --env BRAVE_API_KEY='<BRAVE_API_KEY>' --env GITHUB_TOKEN='<GITHUB_TOKEN>' -- docker run -i --rm --init --mount 'type=bind,source=<your-project-path>/app,target=/root_project/app' --mount 'type=bind,source=<your-project-path>/config/.env,target=/root_project/config/.env' mcp-server:latest

~/.cursor/mcp.json

{
  "mcpServers": {
    "fhir-server-momentum": {
      "command": "docker",
      "args": [
        "run",
        "-i",
        "--rm",
        "--init",
        "--mount",
        "type=bind,source=<your-project-path>/app,target=/root_project/app",
        "--mount",
        "type=bind,source=<your-project-path>/config/.env,target=/root_project/config/.env",
        "mcp-server:latest"
      ],
      "env": {
        "BRAVE_API_KEY": "<BRAVE_API_KEY>",
        "GITHUB_TOKEN": "<GITHUB_TOKEN>"
      }
    }
  }
}

.vscode/mcp.json

{
  "servers": {
    "fhir-server-momentum": {
      "type": "stdio",
      "command": "docker",
      "args": [
        "run",
        "-i",
        "--rm",
        "--init",
        "--mount",
        "type=bind,source=<your-project-path>/app,target=/root_project/app",
        "--mount",
        "type=bind,source=<your-project-path>/config/.env,target=/root_project/config/.env",
        "mcp-server:latest"
      ],
      "env": {
        "BRAVE_API_KEY": "<BRAVE_API_KEY>",
        "GITHUB_TOKEN": "<GITHUB_TOKEN>"
      }
    }
  }
}

~/.gemini/settings.json

{
  "mcpServers": {
    "fhir-server-momentum": {
      "command": "docker",
      "args": [
        "run",
        "-i",
        "--rm",
        "--init",
        "--mount",
        "type=bind,source=<your-project-path>/app,target=/root_project/app",
        "--mount",
        "type=bind,source=<your-project-path>/config/.env,target=/root_project/config/.env",
        "mcp-server:latest"
      ],
      "env": {
        "BRAVE_API_KEY": "<BRAVE_API_KEY>",
        "GITHUB_TOKEN": "<GITHUB_TOKEN>"
      }
    }
  }
}

claude_desktop_config.json

{
  "mcpServers": {
    "fhir-server-momentum": {
      "command": "docker",
      "args": [
        "run",
        "-i",
        "--rm",
        "--init",
        "--mount",
        "type=bind,source=<your-project-path>/app,target=/root_project/app",
        "--mount",
        "type=bind,source=<your-project-path>/config/.env,target=/root_project/config/.env",
        "mcp-server:latest"
      ],
      "env": {
        "BRAVE_API_KEY": "<BRAVE_API_KEY>",
        "GITHUB_TOKEN": "<GITHUB_TOKEN>"
      }
    }
  }
}

.trae/mcp.json

{
  "mcpServers": {
    "fhir-server-momentum": {
      "command": "docker",
      "args": [
        "run",
        "-i",
        "--rm",
        "--init",
        "--mount",
        "type=bind,source=<your-project-path>/app,target=/root_project/app",
        "--mount",
        "type=bind,source=<your-project-path>/config/.env,target=/root_project/config/.env",
        "mcp-server:latest"
      ],
      "env": {
        "BRAVE_API_KEY": "<BRAVE_API_KEY>",
        "GITHUB_TOKEN": "<GITHUB_TOKEN>"
      }
    }
  }
}

Environment variables

BRAVE_API_KEY
GITHUB_TOKEN

Replace the placeholders with your own credentials and keep them out of version control.

Setup

Environment variables

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