Biomedical research server for searching literature, clinical trials, genes, variants, drugs and diseases from sources such as PubMed and ClinicalTrials.gov.
Setup
Choose your client, copy the config, then fill in any required environment variables.
claude mcp add biomcp -- uv run --with biomcp-python biomcp run~/.codex/config.toml
[mcp_servers.biomcp]
command = "uv"
args = ["run", "--with", "biomcp-python", "biomcp", "run"]
# codex mcp add biomcp -- uv run --with biomcp-python biomcp run~/.cursor/mcp.json
{
"mcpServers": {
"biomcp": {
"command": "uv",
"args": [
"run",
"--with",
"biomcp-python",
"biomcp",
"run"
]
}
}
}.vscode/mcp.json
{
"servers": {
"biomcp": {
"type": "stdio",
"command": "uv",
"args": [
"run",
"--with",
"biomcp-python",
"biomcp",
"run"
]
}
}
}~/.gemini/settings.json
{
"mcpServers": {
"biomcp": {
"command": "uv",
"args": [
"run",
"--with",
"biomcp-python",
"biomcp",
"run"
]
}
}
}claude_desktop_config.json
{
"mcpServers": {
"biomcp": {
"command": "uv",
"args": [
"run",
"--with",
"biomcp-python",
"biomcp",
"run"
]
}
}
}.trae/mcp.json
{
"mcpServers": {
"biomcp": {
"command": "uv",
"args": [
"run",
"--with",
"biomcp-python",
"biomcp",
"run"
]
}
}
}